nicpe84

Nicholas Pearce

Assistant Professor

In the Data-Driven Determination of Macromolecular Structures (D3MS) group, we develop new experimental and computational approaches to unravel the subtleties of protein structures and achieve unprecendented levels of detail in macromolecular models.

About the d3ms group

In the d3ms group, we develop new methods for determining and analysing macromolecular structures by X-ray crystallography & Cryo-EM.

Proteins perform an incredibly large range of functions in living organisms, from catalysis to signalling. Protein functions are intricately linked to their shape, as key atoms need to be precisely arranged to allow catalysis of chemical reactions, or to recognise a complementary binding partner. Determining the structures of proteins can therefore give us great insights into how they work, and how we might design molecules which bind to proteins and change their behaviour.

However, current models massively underrepresent the complexity of protein structures and present them as static sets of atoms. In reality, proteins are flexible and in constant motion, and this flexibility can be crucial for enabling the protein’s function. Moreover, the flexibility of the protein can be regulated by binding molecules, meaning that proteins can be made more or less active by changing their dynamics.

In the Data-Driven Determination of Macromolecular Structures (D3MS) group, we develop new experimental and computational approaches to unravel the subtleties of protein structures and achieve unprecendented levels of detail in macromolecular models.

Check out our group website for more information!

Publications

2024

George H. Hutchins, Sebastian Kiehstaller, Pascal Poc, Abigail H. Lewis, Jisun Oh, Raya Sadighi, Nicholas Pearce, Mohamed Ibrahim, Ivana Drienovska, Anouk M. Rijs, Saskia Neubacher, Sven Hennig, Tom N. Grossmann (2024) Covalent bicyclization of protein complexes yields durable quaternary structures Chem, Vol. 10 (Article in journal) Continue to DOI

2023

Jon Agirre, Mihaela Atanasova, Haroldas Bagdonas, Charles B. Ballard, Arnaud Basle, James Beilsten-Edmands, Rafael J. Borges, David G. Brown, J. Javier Burgos-Marmol, John M. Berrisford, Paul S. Bond, Iracema Caballero, Lucrezia Catapano, Grzegorz Chojnowski, Atlanta G. Cook, Kevin D. Cowtan, Tristan I. Croll, Judit E. Debreczeni, Nicholas E. Devenish, Eleanor J. Dodson, Tarik R. Drevon, Paul Emsley, Gwyndaf Evans, Phil R. Evans, Maria Fando, James Foadi, Luis Fuentes-Montero, Elspeth F. Garman, Markus Gerstel, Richard J. Gildea, Kaushik Hatti, Maarten L. Hekkelman, Philipp Heuser, Soon Wen Hoh, Michael A. Hough, Huw T. Jenkins, Elisabet Jimenez, Robbie P. Joosten, Ronan M. Keegan, Nicholas Keep, Eugene B. Krissinel, Petr Kolenko, Oleg Kovalevskiy, Victor S. Lamzin, David M. Lawson, Andrey A. Lebedev, Andrew G. W. Leslie, Bernhard Lohkamp, Fei Long, Martin Maly, Airlie J. McCoy, Stuart J. McNicholas, Ana Medina, Claudia Millan, James W. Murray, Garib N. Murshudov, Robert A. Nicholls, Martin E. M. Noble, Robert Oeffner, Navraj S. Pannu, James M. Parkhurst, Nicholas Pearce, Joana Pereira, Anastassis Perrakis, Harold R. Powell, Randy J. Read, Daniel J. Rigden, William Rochira, Massimo Sammito, Filomeno Sanchez Rodriguez, George M. Sheldrick, Kathryn L. Shelley, Felix Simkovic, Adam J. Simpkin, Pavol Skubak, Egor Sobolev, Roberto A. Steiner, Kyle Stevenson, Ivo Tews, Jens M. H. Thomas, Andrea Thorn, Josep Trivino Valls, Ville Uski, Isabel Uson, Alexei Vagin, Sameer Velankar, Melanie Vollmar, Helen Walden, David Waterman, Keith S. Wilson, Martyn D. Winn, Graeme Winter, Marcin Wojdyr, Keitaro Yamashita (2023) The CCP4 suite: integrative software for macromolecular crystallography Acta Crystallographica Section D: Structural Biology, Vol. 79, p. 449-461 (Article in journal) Continue to DOI